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Species belonging to selected taxon:
Brassica napus
ABOUT THIS RECORD
ID:
MNEST044792
species:
Brassica napus
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTCTCTCTATGTCA
mismatches:
3
bulges:
1
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCAC
ACAAAGGGGGAATTGTATAAAATTAAGTTTGTTGTATATAGTTGCTTTTGCGT
GCTCACTCTCTCTATGTCA
dot-bracket secondary structure
.((((..(((((((((((((
.((((((...(((((((((.(((.......))).))))))))).)))))).))
)))))))))))...)))).
SIMILARITIES
miRBase
ath-MIR156d
:
1e-18
PMRD
ath-miRf10567-akr
:
1e-18
microPC
miR156
:
3e-47
UniProt
no hits
RFAM
mir-156: 2e-17
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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